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Virus-Host Interactions Susanne M. Bailer

Virus-Host Interactions By Susanne M. Bailer

Virus-Host Interactions by Susanne M. Bailer


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Summary

This volume covers various aspects of virological research, including molecular interactions and regulatory mechanisms on the protein as well as the RNA level. It features step-by-step, readily reproducible protocols and key implementation advice.

Virus-Host Interactions Summary

Virus-Host Interactions: Methods and Protocols by Susanne M. Bailer

Virus-Host Interactions: Methods and Protocols covers various aspects of virological research, such as biochemical approaches, including molecular interactions and regulatory mechanisms on the protein as well as the RNA level with a strong focus on the manifold possibilities to study protein-protein interactions, as well as cell biological and immunological methodologies. Viruses represent a reduced form of life that depends on host cells for propagation. To this end, viruses approach and penetrate cells and usurp cellular machineries for their own benefit. Recent technological improvements have enabled the systematic analysis of the virus-host interplay be it on the genomic, the transcriptomic, or proteomic level. In parallel, bioinformatic tools have emerged in support of the large datasets generated by these high-throughput approaches. Written in the successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible protocols, and notes on troubleshooting and avoiding known pitfalls.

Authoritative and easily accessible, Virus-Host Interactions: Methods and Protocols will prove invaluable to professionals and novices with its well-honed methodologies and protocols.

Table of Contents

1. A High-Throughput Yeast Two Hybrid Protocol to Determine Virus-Host Protein Interactions

Hannah Striebinger, Manfred Koegl, and Susanne M. Bailer

2. Analysis of Protein-Protein Interactions Using LUMIER Assay

Sonja Blasche and Manfred Koegl

3. Detection of Protein Interactions During Virus Infection by Bimolecular Fluorescence Complementation

Stefan Becker and Jens von Einem

4. Discovery of Host-Viral Protein Complexes During Infection

Daniell L. Rowles, Scott S. Terhune, and Ileana M. Cristea

5. Screening for Host Proteins with Pro- and Antiviral Activity Using High-Throughput RNAi

Samantha J. Griffiths

6. High Resolution Gene Expression Profiling of RNA Synthesis, Processing and Decay by Metabolic Labelling of Newly Transcribed RNA using 4-thiouridine

Lars Doelken

7. Isolation and Characterization of Pathogen-Bearing Endosomes Enables Identification of New Cellular Cofactors and Analysis of Endosomal Escape

Konstanze D. Scheffer, Ruth Popa-Wagner and Luise Florin

8. Computational Analysis of Virus-Host Interactomes

Caroline C. Friedel

9. Interspecies Heterokaryon Assay to Characterize the Nucleocytoplasmic Shuttling of Herpesviral Proteins

Shuai Wang, Kezheng Wang, and Chunfu Zheng

10. Detection of Integrated Herpesvirus Genomes by Fluorescent in situ Hybridization (FISH)

Benedikt Kaufer

11. Fast Generation of Stable Cell Lines Expressing Fluorescent Marker Molecules to Study Pathogen Induced Processes

Jens Bernhard Bosse, Jessica Ragues, and Harald Wodrich

12. Determination of HSV-1 Infectivity Using a Luciferase Reporter Cell Line

Diana Lieber and Susanne M. Bailer

13. Generation of a Cell Line for Constitutive Expression of Host or Viral miRNAs

Diana Lieber

14. Applications for a Dual Fluorescent Human Cytomegalovirus in the Analysis of Viral Entry

Kerstin Laib Sampaio, Gerhard Jahn, and Christian Sinzger

15. High Temporal Resolution Imaging Reveals Endosomal Membrane Penetration and Escape of Adenoviruses in Real-Time

Ruben Martinez, Andrew M. Burrage, Christopher M. Wiethoff, and Harald Wodrich

16. Three-Dimensional Visualization of Virus Infected Cells by Serial Sectioning - An Electron Microscopic Study Using Resin Embedded Cells

Martin Schauflinger, Clarissa Villinger, and Paul Walther

17. 3D Tissue Model for Herpes Simplex Virus-1 Infections

Ina Hogk, Steffen Rupp, and Anke Burger-Kentischer

18. In vivo Visualization of Encephalitic Lesions in Herpes Simplex Virus Type 1 (HSV-1) Infected Mice by Magnetic Resonance Imaging (MRI)

Wali Hafezi and Verena Hoerr

19. Detection of Antigen-Specific T Cells Based on Intracellular Cytokine Staining Using Flow-Cytometry

Tina Schmidt and Martina Sester

20. Functional NK Cell Cytotoxicity Assays Against Virus Infected Cells

Rebecca J. Aicheler and Richard J. Stanton

21. Assessment of Natural Killer Cell Responses to Human Cytomegalovirus Infected Macrophages

Zeguang Wu, Giada Frascaroli, and Thomas Mertens

22. Analysis of Cell Migration During HCMV Infection

Stefania Varani and Giada Frascaroli

23. Gene Targeting in Mice: A Review

Hicham Bouabe and Klaus Okkenhaug

24. A Protocol for Construction of Gene Targeting Vectors and Generation of Homologous Recombinant ES Cells

Hicham Bouabe and Klaus Okkenhaug

25. Measurement of Mouse Cytomegalovirus Induced Interferon- with Immortalized Luciferase Reporter Cells

Evgenia Scheibe, Stefan Lienenklaus, Tobias May, Vladimir Goncalves Magalhaes, Siegfried Weiss, and Melanie M. Brinkmann

Additional information

NLS9781493963089
9781493963089
1493963082
Virus-Host Interactions: Methods and Protocols by Susanne M. Bailer
New
Paperback
Humana Press Inc.
2016-08-23
372
N/A
Book picture is for illustrative purposes only, actual binding, cover or edition may vary.
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